Index

A

add_channel_information() (in module intan.io._rhd_header_parsing) add_feature_directory() (EMGViewerTk method) add_num_channels() (in module intan.io._rhd_header_parsing) add_scalebars() (EMGViewerTk method) (in module intan.plotting) (in module intan.plotting._waterfall) add_signal_group_information() (in module intan.io._rhd_header_parsing) add_training_directory() (EMGViewerTk method) adjust_path() (in module intan.io._file_utils)

advance_indices() (in module intan.io._rhd_block_parser) align_channels_by_name() (in module intan.io._utilities) append_file() (EMGTrialSelector method) append_new_channel() (in module intan.io._rhd_header_parsing) apply_filters() (EMGRealTimePredictor method), [1] (RealtimePlotter method), [1] apply_notch_filter() (in module intan.io._rhd_loader) apply_training_filters() (EMGViewerTk method) apply_visualization_filters() (EMGViewerTk method)

B

bandpass_filter() (in module intan.processing._filters) build_acquisition_tab() (EMGViewerTk method) build_filtering_tab() (EMGViewerTk method) build_indices_from_mapping() (in module intan.io._utilities)

build_layout() (EMGViewerTk method) build_training_dataset() (EMGViewerTk method) build_training_tab() (EMGViewerTk method) build_trials_tab() (EMGViewerTk method) bytes_per_signal_type() (in module intan.io._rhd_header_parsing)

C

calculate_data_size() (in module intan.io._rhd_header_parsing) calculate_num_samples() (in module intan.io._rhd_header_parsing) calculate_rms() (in module intan.processing._features) canonical_label() (in module intan.io._canonicalizer) CFICA2() (in module intan.decomposition._cfica) ChannelNotFoundError check_end_of_file() (in module intan.io._file_utils) check_file_present() (in module intan.io._file_utils) check_magic_number() (in module intan.io._rhd_header_parsing) classification_report_safe() (in module intan.ml)

clear_indices() (EMGTrialSelector method) common_average_reference() (in module intan.processing._features) compute_grid_average() (in module intan.processing._features) compute_rms() (in module intan.processing._features) compute_rolling_rms() (in module intan.processing._features) confusion_matrix_safe() (in module intan.ml) convert_events_to_list() (in module intan.io._utilities) copy_display_to_training_filters() (EMGViewerTk method) corr_constrained_ica() (in module intan.decomposition._cfica) current_channel (EMGTrialSelector attribute)

D

data_to_result() (in module intan.io._rhd_header_parsing) delay_embed() (in module intan.decomposition._cfica) delete_selected() (EMGTrialSelector method) (EMGViewerTk method)

discard_redundant_spikes() (in module intan.decomposition._cfica) discover_and_group_files() (in module intan.io._utilities) discover_data_files() (in module intan.io._file_utils) downsample() (in module intan.processing._features)

E

emg_data (EMGTrialSelector attribute) EMGRealTimePredictor (class in intan.ml) (class in intan.ml._ml_utilities) EMGTrialSelector (class in intan.applications._emg_trial_selector) EMGViewer (in module intan.applications._emg_viewer) EMGViewerTk (class in intan.applications._emg_viewer) enable_indexing() (EMGTrialSelector method) (EMGViewerTk method)

envelope_extraction() (in module intan.processing._features) evaluate_against_events() (in module intan.ml) extract_and_classify() (EMGRealTimePredictor method), [1] extract_digital_data() (in module intan.io._rhd_loader) extract_edges() (EMGTrialSelector method) extract_features() (in module intan.processing._features) extract_features_from_directories() (EMGViewerTk method) extract_features_sliding_window() (in module intan.processing._features) extract_td_features() (EMGViewerTk method)

F

feature_spec_from_registry() (in module intan.processing._features) file_stem() (in module intan.io._utilities) FileSizeError filter_emg() (in module intan.processing._filters) find_channel_in_group() (in module intan.io._rhd_channel_utils) find_channel_in_header() (in module intan.io._rhd_channel_utils)

find_csv_dir() (in module intan.io._csv_utils) find_dataset_file() (in module intan.io._file_utils) find_event_file() (in module intan.io._file_utils) find_event_for_file() (in module intan.io._utilities) find_npz_by_label() (in module intan.io._npz_utils) findFile() (in module intan.samples._find_file)

G

get_bytes_per_data_block() (in module intan.io._rhd_header_parsing) get_file_paths() (in module intan.io._file_utils) get_label_for_sample() (EMGRealTimePredictor method), [1] get_message() (EMGRealTimePredictor method), [1]

get_metrics_file() (in module intan.processing._metrics_utils) get_timestamp_signed() (in module intan.io._rhd_block_parser) get_trained_channel_names() (in module intan.io._utilities) GetSampleRateFailure glob_first() (in module intan.io._file_utils)

H

header_to_result() (in module intan.io._rhd_header_parsing)

I

indexing_enabled (EMGTrialSelector attribute) init_filters() (RealtimePlotter method), [1] init_plot() (RealtimePlotter method), [1] initialize_channels() (in module intan.io._rhd_header_parsing) initialize_memory() (in module intan.io._rhd_block_parser) insert_channel_labels() (EMGViewerTk method) (in module intan.plotting) (in module intan.plotting._waterfall) insert_vertical_labels() (EMGViewerTk method) (in module intan.plotting) (in module intan.plotting._waterfall) intan module intan.applications module intan.applications._emg_trial_selector module intan.applications._emg_viewer module intan.applications._launcher module intan.decomposition module intan.decomposition._cfica module intan.decomposition._pca module intan.interface module intan.io module intan.io._canonicalizer module intan.io._csv_utils module intan.io._exceptions module intan.io._file_utils module

intan.io._npz_utils module intan.io._rhd_block_parser module intan.io._rhd_channel_utils module intan.io._rhd_header_parsing module intan.io._rhd_loader module intan.io._utilities module intan.ml module intan.ml._ml_utilities module intan.plotting module intan.plotting._realtime_plotter module intan.plotting._waterfall module intan.processing module intan.processing._features module intan.processing._filters module intan.processing._metrics_utils module intan.samples module intan.samples._find_file module integrated_emg() (in module intan.processing._features) InvalidMagicNumber InvalidReceivedDataSize

K

kernel_fastica() (in module intan.decomposition._cfica)

L

labels_from_events() (in module intan.io._file_utils) last_event_index() (in module intan.io._file_utils) launch_emg_trial_selector() (in module intan.applications._launcher) launch_emg_viewer() (in module intan.applications._launcher) list_npz_files() (in module intan.io._npz_utils) load_and_merge_datasets() (in module intan.io._npz_utils) load_channel_mapping() (in module intan.io._utilities) load_config_file() (in module intan.io._file_utils) load_csv_file() (in module intan.io._csv_utils) load_csv_files() (in module intan.io._csv_utils) load_dat_file() (in module intan.io._rhd_loader) load_feature_segments() (EMGViewerTk method) load_features_npz() (in module intan.applications._emg_viewer) load_file() (EMGTrialSelector method) (EMGViewerTk method) load_files_from_path() (in module intan.io._rhd_loader) load_files_merged() (in module intan.io._utilities) load_json_file() (in module intan.io._file_utils)

load_labeled_file() (in module intan.io._file_utils) load_metadata_json() (in module intan.io._utilities) load_metrics_data() (in module intan.processing._metrics_utils) load_model_obj() (in module intan.applications._emg_viewer) load_npz_file() (in module intan.io._npz_utils) load_npz_files() (in module intan.io._npz_utils) load_npz_record() (in module intan.io._npz_utils) load_per_signal_files() (in module intan.io._rhd_loader) load_rhd_file() (in module intan.io._rhd_loader) load_segment_and_visualize() (EMGViewerTk method) load_single_file() (in module intan.io._utilities) load_table() (EMGViewerTk method) load_training_dataset() (in module intan.io._npz_utils) load_trials_csv() (in module intan.applications._emg_viewer) load_txt_config() (in module intan.io._file_utils) load_yaml_file() (in module intan.io._file_utils) lock_params_to_meta() (in module intan.io._utilities) lowpass_filter() (in module intan.processing._filters)

M

mean_absolute_value() (in module intan.processing._features) module intan intan.applications intan.applications._emg_trial_selector intan.applications._emg_viewer intan.applications._launcher intan.decomposition intan.decomposition._cfica intan.decomposition._pca intan.interface intan.io intan.io._canonicalizer intan.io._csv_utils intan.io._exceptions intan.io._file_utils intan.io._npz_utils intan.io._rhd_block_parser intan.io._rhd_channel_utils intan.io._rhd_header_parsing intan.io._rhd_loader intan.io._utilities intan.ml intan.ml._ml_utilities intan.plotting intan.plotting._realtime_plotter intan.plotting._waterfall intan.processing intan.processing._features intan.processing._filters intan.processing._metrics_utils intan.samples intan.samples._find_file

N

normalize() (in module intan.processing._features) normalize_channel_name_1based() (in module intan.io._utilities)

normalize_name() (in module intan.io._utilities) notch_filter() (in module intan.processing._filters)

O

on_click() (EMGTrialSelector method) (EMGViewerTk method)

on_closing() (EMGTrialSelector method) (EMGViewerTk method) orthogonalize() (in module intan.processing._features)

P

parse_channel_range() (EMGViewerTk method) parse_channel_ranges() (in module intan.processing._filters) parse_channel_spec() (in module intan.io._utilities) parse_channels_spec() (in module intan.io._utilities) parse_data() (in module intan.io._rhd_loader) parse_event_file() (in module intan.io._utilities) parse_numeric_args() (in module intan.io._utilities) pca() (in module intan.decomposition._pca) plot_channel() (EMGTrialSelector method) (EMGViewerTk method) plural() (in module intan.io._rhd_block_parser) (in module intan.io._rhd_header_parsing)

predict_batch() (in module intan.ml) predict_file() (in module intan.ml) predict_from_device() (in module intan.ml) predict_realtime_stream() (in module intan.ml) preprocess_emg() (in module intan.processing._filters) print_all_channel_names() (in module intan.io._rhd_channel_utils) print_header_summary() (in module intan.io._rhd_header_parsing) print_names_in_group() (in module intan.io._rhd_channel_utils) print_progress() (in module intan.io._file_utils) print_record_time_summary() (in module intan.io._rhd_header_parsing) process_emg_pipeline() (in module intan.processing._filters)

Q

QStringError

R

read_adc_file() (in module intan.io._rhd_loader) read_all_data_blocks() (in module intan.io._rhd_block_parser) read_amplifier_file() (in module intan.io._rhd_loader) read_analog_signal_type() (in module intan.io._rhd_block_parser) read_analog_signals() (in module intan.io._rhd_block_parser) read_auxiliary_file() (in module intan.io._rhd_loader) read_channel_structure() (in module intan.io._rhd_header_parsing) read_config_file() (in module intan.io._file_utils) read_digital_signal_type() (in module intan.io._rhd_block_parser) read_digital_signals() (in module intan.io._rhd_block_parser) read_eval_board_mode() (in module intan.io._rhd_header_parsing) read_freq_settings() (in module intan.io._rhd_header_parsing) read_header() (in module intan.io._rhd_header_parsing) read_impedance_test_frequencies() (in module intan.io._rhd_header_parsing) read_int32() (in module intan.io._rhd_block_parser) read_new_channel() (in module intan.io._rhd_header_parsing) read_notch_filter_frequency() (in module intan.io._rhd_header_parsing) read_notes() (in module intan.io._rhd_header_parsing) read_num_temp_sensor_channels() (in module intan.io._rhd_header_parsing) read_one_data_block() (in module intan.io._rhd_block_parser) read_qstring() (in module intan.io._rhd_header_parsing)

read_reference_channel() (in module intan.io._rhd_header_parsing) read_sample_rate() (in module intan.io._rhd_header_parsing) read_time_file() (in module intan.io._rhd_loader) read_timestamps() (in module intan.io._rhd_block_parser) read_uint16() (in module intan.io._rhd_block_parser) read_uint32() (in module intan.io._rhd_block_parser) read_version_number() (in module intan.io._rhd_header_parsing) RealtimePlotter (class in intan.plotting) (class in intan.plotting._realtime_plotter) rectify() (in module intan.processing._features) refresh_labels_list() (EMGViewerTk method) remove_selected_label() (EMGViewerTk method) remove_training_directory() (EMGViewerTk method) resolve_channel_selection() (in module intan.io._utilities) root_mean_square() (in module intan.processing._features) run() (RealtimePlotter method), [1] run_pca_visualization() (EMGViewerTk method) run_prediction_loop() (EMGRealTimePredictor method), [1] run_realtime_plot() (in module intan.plotting) (in module intan.plotting._realtime_plotter) run_trial_segmentation() (EMGViewerTk method)

S

sample_index_to_timestamp() (EMGTrialSelector method) sampling_rate (EMGTrialSelector attribute) save_as_npz() (in module intan.io._npz_utils) save_as_npz_compressed() (in module intan.io._npz_utils) save_features_npz() (in module intan.applications._emg_viewer) save_model_obj() (in module intan.applications._emg_viewer) save_table() (EMGTrialSelector method) (EMGViewerTk method) save_training_dataset() (in module intan.io._npz_utils) save_trials_csv() (in module intan.applications._emg_viewer)

scale_analog_data() (in module intan.io._rhd_loader) scale_timestamps() (in module intan.io._rhd_loader) scroll_plot() (EMGViewerTk method) select_training_channels_by_name() (in module intan.io._utilities) set_frequency_parameters() (in module intan.io._rhd_header_parsing) set_num_samples_per_data_block() (in module intan.io._rhd_header_parsing) set_sample_rates() (in module intan.io._rhd_header_parsing) sliding_window() (in module intan.processing._filters) slope_sign_changes() (in module intan.processing._features) stem_without_timestamp() (in module intan.io._file_utils) stop() (EMGRealTimePredictor method), [1]

T

threshold_cov() (in module intan.decomposition._cfica) time_vector (EMGTrialSelector attribute)

trained_channel_names_from_dataset_npz() (in module intan.io._utilities) trained_channel_names_from_meta() (in module intan.io._utilities)

U

UnknownChannelTypeError UnrecognizedFileError update() (RealtimePlotter method), [1]

update_channel() (EMGTrialSelector method) (EMGViewerTk method) update_training_labels_from_directory() (EMGViewerTk method) update_training_labels_from_filename() (EMGViewerTk method)

V

variance() (in module intan.processing._features)

visualize_selected_segment() (EMGViewerTk method)

W

waterfall() (in module intan.plotting) (in module intan.plotting._waterfall) waterfall_gui_plot() (EMGViewerTk method) waveform_estimation() (in module intan.decomposition._cfica)

waveform_length() (in module intan.processing._features) whitening_pca() (in module intan.decomposition._cfica) window_rms() (in module intan.processing._features) window_rms_1D() (in module intan.processing._features)

Z

z_score_norm() (in module intan.processing._features)

zero_crossings() (in module intan.processing._features)